Cancer gene expression database cged
WebGene Expression Omnibus. GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are accepted. Tools are provided to help users query and download experiments and curated gene expression profiles. WebThe Cell Line section contains information on genome-wide RNA expression profiles of human protein-coding genes in 1055 human cell lines, including 985 cancer cell lines. The transcriptomics analysis includes classification based on specificity analysis across 27 cancer types, distribution and expression cluster analysis across all cell lines ...
Cancer gene expression database cged
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Web19 rows · The CGED database comprises gene expression profile data and related clinical information ... WebJul 11, 2024 · The GENT2 database provides the following five functions: 1) a landscape of gene expression profile across 72 normal and tumor tissues, 2) cancer subtype …
WebMay 5, 2008 · In contrast, resources like CGED , SIEGE and GeneAtlas are specialized databases that address specific problems; CGED concentrates on gene expression in various human cancer tissues, SIEGE focuses on epithelial gene expression changes induced by smoking in humans and Gene Atlas provides the expression profiles of … WebDec 17, 2004 · The expression data are obtained by a high-throughput RT–PCR technique, and patients are recruited mainly from a single hospital. In the cancer gene expression …
WebGene Expression Omnibus. GEO is a public functional genomics data repository supporting MIAME-compliant data submissions. Array- and sequence-based data are … WebJul 3, 2024 · Tremendous amount of RNA sequencing data have been produced by large consortium projects such as TCGA and GTEx, creating new opportunities for data mining and deeper understanding of gene functions. While certain existing web servers are valuable and widely used, many expression analysis functions n …
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WebThis review presents an overview of publicly available databases relevant to proteomics studies in cancer research. They include gene/protein expression databases, gene mutation and single nucleotide polymorphisms databases, tumor antigen databases, protein–protein interaction, and biological pathway databases. east river shipyard ltdWebMay 3, 2005 · The expression data are obtained by a high-throughput RT-PCR technique, and patients are recruited mainly from a single hospital. The data can be retrieved either … east river side valley\u0027s economyWebJan 1, 2005 · The expression data are obtained by a high-throughput RT–PCR technique, and patients are recruited mainly from a single hospital. In the cancer gene expression database (CGED), the expression and clinical data are presented in a way useful for scientists interested in specific genes or biological functions. east riverside drive bothell waWebNov 7, 2009 · Previously we have established a cancer-related gene expression signature database (under submission). Another important extension in the future will be to … east river soccer associationWebOct 28, 2024 · By mining TCGA RNA-seq data, we have identified six major oncoviruses across cancer types and further correlated viral infection to changes in host gene … east river shipyardWebMerged mutation calls (Coding regions, germlin filtered) CCLE structural variants (SvABA calls) for 329 cell lines. CCLE ABSOLUTE copy number analysis results. Copy-number … east river soccer complex bluefield wvWeb21 rows · Copy number, Mutation, Gene Expression: No Yes Human: No Yes No Mouse Retrovirus Tagged Cancer Gene Database →: Institute of Molecular and Cell Biology, … cumberland county police chase